Talks and presentations

July 05, 2026

Artificial Intelligence in Nanomaterials and Nanobio Interface Research: A Tutorial on Prediction, Discovery, and Design, IEEE NANO 2026, Nanjing University International Conference Center, Nanjing, China

Artificial intelligence (AI) is transforming nanoscience by enabling data-driven prediction, discovery, and design of nanomaterials and nanobio interfaces. Because nanobio interactions involve complex physicochemical and environmental factors, experimental exploration is often costly and time-consuming. AI methods provide powerful tools to model these multidimensional relationships and predict nanomaterial properties and biological interactions. Recent advances in machine learning (ML), representation learning, and large language models (LLMs) have further expanded AI capabilities in nanotechnology. Classical ML models remain widely used for structured datasets, while encoding models and LLM-based systems enable knowledge extraction, reasoning, and automated research workflows. Although some of these approaches have already been applied in nanomaterial and nanobio interface research, others remain emerging technologies with significant potential for future applications. This tutorial reviews AI methodologies for nanomaterial and nanobio interface research across three paradigms: AI for Prediction, AI for Discovery, and AI for Design. We also discuss practical considerations such as model explainability, generalization, and data quality to guide responsible and effective applications of AI in nanoscience. This tutorial aims to provide practical guidance for leveraging AI to accelerate innovation in nanomaterial and nanobio interface research, while fostering a balanced understanding of both the strengths and limitations of current AI methodologies.

June 22, 2026

Position Paper: Unlocking the Potential of AI Researchers in Scientific Discovery-What Is Missing?, WCCI 2026, MECC, Maastricht, Netherlands

The potential of AI researchers in scientific discovery remains largely untapped. Over the past decade, AI for Science (AI4Science) publications in 145 Nature Index journals have increased fifteen-fold, yet they still account for less than 3% of the total publications. Drawing upon the Diffusion of Innovation theory, we project AI4Science’s share of total publications to rise from 2.72% in 2024 to approximately 20% by 2050. Achieving this shift requires fully harnessing the potential of AI researchers, as nearly 95% of AI-driven research in these journals is led by experimental scientists. To facilitate this, we propose structured workflows and strategic interventions to position AI researchers at the forefront of scientific discovery. Specifically, we identify three critical pathways: equipping experimental scientists with accessible AI tools to amplify the impact of AI researchers, bridging cognitive and methodological gaps to enable more direct involvement in scientific discovery, and proactively fostering a thriving AI-driven scientific ecosystem. By addressing these challenges, we aim to empower AI researchers as key drivers of future scientific breakthroughs.

June 19, 2026

From Explainable AI to Agents for Science: A New Paradigm, 1st Westlake-ELTE workshop 2026, ELTE Faculty of Informatics, Budapest, Hungary

This talk explores the emerging role of artificial intelligence in scientific discovery. It first highlights the importance of explainability in AI for Science, discussing how interpretable AI approaches can improve model transparency, identify data biases and failure modes, incorporate domain knowledge, and facilitate scientific hypothesis generation. This talk introduces different categories of explainable AI methods, including knowledge-infused, knowledge-verified, knowledge-based, and knowledge-agnostic approaches, and discusses how they can enhance the reliability and scientific value of AI-driven discoveries. It also presents examples of applying explainable AI to scientific problems, including nano–bio interface research, to demonstrate how AI can move beyond prediction toward mechanistic understanding. This talk further explores the transition from large language models to AI agents for science, highlighting their potential as collaborative research partners that can support scientific reasoning, workflow automation, and discovery. It concludes by emphasizing that while AI can accelerate the process of answering scientific questions, human researchers remain essential for identifying meaningful questions and driving scientific innovation.

September 01, 2025

A Million-scale Dataset and Generalizable Foundation Model for Nanomaterial-Protein Interactions, ChinaNano 2025, Beijing International Convention Center, Beijing, China

Unlocking the potential of nanomaterials in medicine and environmental science hinges on understanding their interactions with proteins, a complex decision space where AI is poised to make a transformative impact. However, progress has been hindered by limited datasets and the restricted generalizability of existing models. Here, we propose NanoPro-3M, the largest nanomaterial-protein interaction dataset to date, comprising over 3.2 million samples and 37,000 unique proteins. Leveraging this, we present NanoProFormer, a foundational model that predicts nanomaterial-protein affinities through multimodal representation learning, demonstrating strong generalization, handling missing features, and unseen nanomaterials or proteins. We show that multimodal modeling significantly outperforms single-modality approaches and identifies key determinants of corona formation. Furthermore, we demonstrate its applicability to a range of downstream tasks through zero-shot inference and fine-tuning. Together, this work establishes a solid foundation for high-performance and generalized prediction of nanomaterial-protein interaction endpoints, reducing experimental reliance and accelerating various in vitro applications.

August 12, 2025

Protein corona foundation model and its application in disease diagnosis, Academic exchange activity, Yuhang Campus, The First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China

AI holds enormous potential for understanding the interactions between nanomaterials and proteins. This talk discussed our work on protein corona datasets and underlying foundation models, and envisioned its broad application prospects in disease diagnosis. AI will enable high-throughput screening and efficient design of nanoenrichment methods for protein biomarkers.

April 18, 2025

Protein Corona Dataset and Foundation Model—Explainability and Knowledge Consistency in AI4Science, AI·Proteomics·Medicine 2025 Spring Mini-Symposium, Yunqi Campus, Westlake University, Hangzhou, China

Upon entering biological environments, nanomaterials rapidly adsorb ambient proteins, forming a “protein corona,” which profoundly influences their recognition, distribution, metabolism, and ultimate biological fate within organisms. This report will introduce our overall research strategy, leveraging AI methodologies to investigate the interactions among nanomaterials, biological systems, and the environment. We will highlight recent advancements in the construction of protein corona datasets and the development of foundational models. Furthermore, the report will briefly outline our work on model interpretability and knowledge consistency within the AI for Science (AI4Science) framework and share our reflections on the potential of AI researchers in scientific discovery.